easyGWAS - Intersection Analysis Results

General Comparison Summary of all GWAS

Select Multiple Hypothesis Correction Method

General Summary Information (Bonferroni (5%))

Selected Experiments

HSIC computes a correlation between the phenotype and the kinship matrix (genetic relatedness matrix).
Thus, the null-model tests the hypothesis, whether the phenotype is not correlated with the genetic relatedness matrix.
* Significant after Bonferroni correction

Publications

authors	title	pub year	journal	volume	pages	doi
Matthew Horton et al.	Genome-wide patterns of genetic variation in worldwide Arabidopsis thaliana accessions from the RegMap panel	2012	Nature Genetics	44	212-216	10.1038/ng.1042
Susanna Atwell et al.	Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines	2010	Nature	465	627-631	10.1038/nature08800
Jun Cao et al.	Whole-genome sequencing of multiple Arabidopsis thaliana populations	2011	Nature Genetics	43	956-963	10.1038/ng.911
Robert J. Schmitz et al.	Patterns of population epigenomic diversity	2013	Nature	495	193-198	10.1038/nature11968
Quan Long et al.	Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden	2013	Nat Genet	45	884-890	10.1038/ng.2678
The 1001 Genomes Consortium et al.	1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana	2016	Cell	NA	N-A	10.1016/j.cell.2016.05.063

Update multiple testing correction method
Update significance level α for correction

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Select Multiple Hypothesis Correction Method

General Summary Information (Bonferroni (5%))

Selected Experiments

Publications