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easyGWAS
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Overview
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Brief Summary
Experiment Type:
Genome-wide Association Study
Species:
Helianthus petiolaris
subsp.
petiolaris
Dataset:
Helianthus petiolaris subsp. petiolaris. SNPs remapped to HA412-HOv2
Phenotype:
Leaf height mid-width (ID: PETpet rm217P29)
Algorithm:
EMMAX
Parameters:
MAF:
0.05
SNP Encoding:
Additive
Transformation:
None
Manhattan Plots
QQ-Plots
SNP Annotations
Summary/Downloads
Use unique SNPs only (only keep one copy of SNPs with the same encoding):
QQ-Plot for all SNPs
Show all chromosomes
QQ-Plot for chromosome Ha412HOChr01
QQ-Plot for chromosome Ha412HOChr02
QQ-Plot for chromosome Ha412HOChr03
QQ-Plot for chromosome Ha412HOChr04
QQ-Plot for chromosome Ha412HOChr05
QQ-Plot for chromosome Ha412HOChr06
QQ-Plot for chromosome Ha412HOChr07
QQ-Plot for chromosome Ha412HOChr08
QQ-Plot for chromosome Ha412HOChr09
QQ-Plot for chromosome Ha412HOChr10
QQ-Plot for chromosome Ha412HOChr11
QQ-Plot for chromosome Ha412HOChr12
QQ-Plot for chromosome Ha412HOChr13
QQ-Plot for chromosome Ha412HOChr14
QQ-Plot for chromosome Ha412HOChr15
QQ-Plot for chromosome Ha412HOChr16
QQ-Plot for chromosome Ha412HOChr17