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easyGWAS
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Overview
Experiment overview
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Brief Summary
Experiment Type:
Genome-wide Association Study
Species:
Arabidopsis thaliana
Dataset:
1001 Genomes Data
Phenotype:
Length (ID: AT1P5954)
Algorithm:
FaSTLMM
Parameters:
MAF:
0.05
SNP Encoding:
Additive
Transformation:
BoxCox
Manhattan Plots
QQ-Plots
SNP Annotations
Summary/Downloads
Use unique SNPs only (only keep one copy of SNPs with the same encoding):
QQ-Plot for all SNPs
Show all chromosomes
QQ-Plot for chromosome 1
QQ-Plot for chromosome 2
QQ-Plot for chromosome 3
QQ-Plot for chromosome 4
QQ-Plot for chromosome 5