Brief Summary
Experiment Type:
Genome-wide Association Study
Species:
Arabidopsis thaliana
Dataset:
AtPolyDB (call method 75, Horton et al.)
Phenotype:
avrRpm1 (ID: AT_P_33)
Algorithm:
EMMAX
Parameters:
MAF:0.1
SNP Encoding:Additive
Transformation:None
Use unique SNPs only (only keep one copy of SNPs with the same encoding):

QQ-Plot for all SNPs Show all chromosomes

QQ-Plot for chromosome 1

QQ-Plot for chromosome 2

QQ-Plot for chromosome 3

QQ-Plot for chromosome 4

QQ-Plot for chromosome 5

easyGWAS is a web application provided by the Machine Learning and Systems Biology Research Department

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