General Information of GWAS |
Project: | Population structure of the Brachypodium species complex and genome wide association of agronomic traits in response to climate | Experiment Type | Genome-wide Association Study |
esayGWAS-ID: | c3f63017-b41a-4e57-ade3-ff3c6077bd9b | Owner: | fergsc |
Date Started: | Feb. 14, 2018, 3:44 a.m. | Date Finished: | Feb. 14, 2018, 3:47 a.m. |
Selected Species: | Brachypodium distachyon |
Selected Dataset: | Subspecies A |
Selected Gene Annotation Set: | None |
Selected SNPs: | All SNPs selected | MAF Filter: | 0.0 |
SNP encoding: | Additive | Selected Principle Components: | 0 |
Phenotype Name: | QY 2 2015 | Selected Transformation: | None |
Selected Algorithm: | EMMAX | Histogram: |
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Number of SNPs before Filtering: | 2057816 | Number of SNPs after Filtering: | 1853843 |
Number of Samples before Filtering: | 63 | Number of Samples after Filtering: | 63 |
AIC Null-Model: | -309.26 | AICc Null-Model: | -309.20 |
BIC Null-Model: | -307.12 | ||
Variance Explained by the Null Model: | 0.26 |